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Friday, January 26, 2007

Three domains, or six reigns?

In the primary schools (or may be it was the secondary, I don't remember exactly), I was taught by my teacher that all living things belong to one of five different Reigns (or kingdoms - but without a king I guess). Animals, Plants, Fungi, Protists, Bacteria.


this is the oldest version with only three kingdom recognised at the time.

Bacteria are the oldest and the simplest, with the others being grouped under the collective label of Eucharyotes. I'm not going to dwelve in details here. check the wikipedia or your biology textbook for that.

Anyway, some time ago I came to know that in fact not all bacteria are born the same. Some of them, called Archeobacteria, do seems to be more rudimentary, yet they are though to have originated Eucharyotes as well.



the whole thing is quite confusing as other people say they are in fact unrelated, and they just sit on the same branch of the tree of life just because 'normal' bacteria are different from both of them.

If you feel like I've confused you, and would like to get clearer idea, here's where you should go. read the posts from the bottom up. cheers

It Snows!!!

I've been waiting for it for quite some time, now... for the moment, single snow crystals are falling down, may be by the end of the day we will see some decent fluffy snow falling down from the sky... I'm looking forward to it.

Well, not really. Tonight, in that case, I'll have to drive over the snow, a thing which I've never tried before. I hope it'll not be too bad. I'll keep you posted.

Thursday, January 25, 2007

How much light?

Plants do convert carbon dioxide in glucose, by means of what is called Clorophillian Photosynthesis. This essentially means that they breath in carbon dioxide, and use the light energy to run a complicated series of molecular machines, called enzymes, which pick and mix CO2 (and water) molecules, take them apart and end up with glucose.

The waste oxygen freed is a powerful venom, so much so that the first great extinction did happen when the level of this toxyc gas in the atmosphere did raise too much, kiling off most of the life of the time, that was anaerobic - i.e., didn't use oxygen. Oh no. Not at all.

Luckyly, some bacteria did manage to use this opxygen to perform the opposite reaction, so that they could live off that waste. Probably at the beginning, it was a simple defense mechanism against this toxic gas, exactly as many bacteria can now take apart toxins which would otherwise accumulate within their body and kill them. It did end up however, as the primary energy production mean for these life forms, which now constitute the great majority of life on Earth. Who knows, may be one day some life form will evolve able to thrive on the mountains of toxic junk that we humans are creating. Think about the Toxic Jungle of Nausicaa of the Valley of The wind.

Anyway. I was told in the elementary school that plants only do this magic at day. At night, when there's no sun, they do consume parto fo that glucose exactly as other animals do. This keep them alive. It makes sense... at night there's no light, so they can't do Photosynthesis. To be fair, a certain amount of glucose burning, unless plants have another magic trick to directly use the energy of the sun to power their system, when this is available. I am not aware of this. So, it's glucose burning. Which produces the same waste as our ordinaryu burning of fossil fuels, i.e. those CO2 and H2O which the plants sequestrated in first place. But there's a big difference. Plants and animals have a molecular machinery able to perform this burning in small, controllated steps, so that they extract as much energy as they can from the fuel, storing it into molecules of ATP(Adenosin TriPhosphate), the Euro of the body. Any other energy currency has its ATP-equivalent. And any structure, large or small, has a more or less fixed price in ATP. Please pardon my euro-centricity, but i fell the euro better fit the role of universal currency as compared to the US$. The states composing the euro zone are much more different, like liver and heart and lungs. Yet, all these organs are built of the same kind of cells, tweaked to perform better in that environment. Fit to perform a particular role. Boph! Anyway.

I got sidetracked...

My initial curiosity was: light can now be always present in a plant's environment. How do they cope with it? do they take advantage of it, or they just shut their eyes at night and do without photosynthesis, even if there's a light bulb half a metre afar? A bit of both i believe. Forcing the cicradian cycle is bound to cause some stress. Some plants will adapt well, some other will not.

I know that Cannabis, for example does actually take full advantage of constant light - don't ask me how I know. I do. and no, I do not grow cannabis in my cellar. But cannabis plants are usually kept under very bright lights. I guess they would not mind growing on Mercury, if only we could send there a greenhouse with enough soil, water and air. Hell, it would probably manage without too. So, bright lights. I can't sleep with bright lights pointing just in front of me.
But if t=it's not too bright, I can sleep just fine. Do plants have a similar request? that is to say, is there any threshold (in lumen) under which a specific plant will not perform photosynthesis, and will instead switch completely to glucose catabolism? I have no freaking clue. Any suggestion is welcome. :-)

Wednesday, January 24, 2007

diary of a cold day...

You wake up in the morning. I mean, before it. kinda 5.30, 'cause your room's noisy heating started, and you crawl to the bathroom to turn it on there too. hate this old house. no double glazing and directly under-the-roof.
Cold as frozen hell.
uhm, I better pee before going back to bed. if only for half an hour. you never know.

...

vrrr... vrrr... piripi piripi beep vrrr... my mobile alarm... Zelda's catch a treasure ringtone from the other mobile, receiving an sms from google calendar to wake me up... bang them on the wall but one of them keep buzzing...

Ok I get it... get up and reach the microwave, with your eyes closed and a bottle in your hands.
I just hope it's milk, not the sardinian blueberry spirit. that wouldn't wake me up, not really.

mug, sugar, milk (or mirto), soluble coffee, chocolate powder. microwave for two'. drink. shower. no wait, first weight yourself, let's see if your body fat %age has changed thanks to those eight lanes in the swimming pool y/day. nope. not a chance.

never mind, quick shower and hunt for lean socks. cotton or wool t-shirt? It's cool in the house, just imagine what it must be outside. animals move, plants don't, I need to move so it's wool. two layers of it. three if you count the jacket. need a new one damn, one of those fancy new multi-coloured american-style kinda of rocky mountain trekker that my indian colleague appreciates. may be next weekend. if I get paid, that is.

OK. trainer shoes on, no I'm not gonna run but they're the most comfortable. sorry love, am not going to look smart and sharp today. too cold outside for my sardinian blood.

off we go... down the stairs (lazy, with the elevator - lift for you englishmen out there)

in the car. no wait! it's all frozen. uhm may be I want to scrape the ice from the windscreen? why cars don't come with automated functions for this? I mean, it happens regularly in half of the EU. how hard can it be to wire some wires (ouch!) in the front windscreen like in the back? never mind scrap scrap scrape, it's done.

jump into the car and rush to work... brr... freezing cold. why do I have to get here before seven? I don't know. that's life I suppose.

well never mind. let's try to start working before ten, for a change. see you later...

update: nice sunny day, although this pale fusion ball blazing up there can't warm up this place above freezing point. it's a miracle that life can survive in these conditions. I mean, i look at the grass outside the window, covered in sparkling ice crystals, and I know it's alive. isn't this wonderful?

Goodbye Blogspot?

What? are you leaving us, Darren? please dont tell me so... I really hope you're just moving over to Scienceblogs.com. Although I don't like their standard layout too much.
Or maybe you found a job and will not have time anymore for those long zoological posts? Pants!
Anyway, good luck.

I'll hunt for you on the i.net.

The Future is Wild

I did long time ago, buy a book which tried to depict how animals would evolve in the next 50MY. The logical premise was tha human would become extinct, something which I find rather likely. If ever there is some primate left, it is going to be rather different from us. Anyway.
The book was OK, but not great, pictures specially were kinda old-fashioned, like from a medieval bestiary. Animals didn't look quite right to me, and mostly were kludged, like trying to force a toad to look-like a rat. bah...

Now, I discovered they made a series inspired on it (just inspired). The future is Wild. It takes under exam three time points, 5, 100 and 200MY from now. It looks pretty interesting, so I'm going to give it a go. Either buy it if I can, or download it if I can't.

Tuesday, January 23, 2007

SCRUBS!!!

did I tell you that the sixth season of Scrubs is running? and do you know that the sixth episode is very very good, all sung in the mind of a patient? click here or the title to download it with bittorrent :-)

Monday, January 22, 2007

Converting movies for my phone

I've been spending the morning (and until now, in fact) playing with a nifty application named 3GP_converter, which uses ffmpeg and such to translate movies into a version readable by my sagem mobile. I've managed to get the video working beautifully, but the sound still gets lost in translation.
Pity. Anyway, I will try later on if I can find some hack able to do it. with Quicktime I can export the file, but most of the settings which should work (H.263 for the video, AMR-narrowband for audio) results in movies which even on the pc stop playing after a few seconds. pants!

Friday, January 19, 2007

Star Wars

All over again. The chinese have managed to shoot down one of their olsd weather satellites.

Frankly, I'm happy they did it. This way, they will have some more pull on bush's administration in getting them round a table to signa treaty to ban such weapons which, apparently, the US have been developing too, albeit enshrouded in secret.

I'm all for a civil conquest of space.

Wednesday, January 17, 2007

Free Shareware Software

I know, it seems like an oxymore, since you usually have to pay for shareware. Still, people at http://www.giveawayoftheday.com/ do actually give away one different (and useful) software every day. Until now, I did get a nice backup utility, an advanced text editor, and a software to compare similarity between images.

Giveaway of the Day

Can't say much about the backup utility, other than it seems to work OK at home, but not on the work computer. In this second case, the scheduler doesn't start the backup, although manual backup is still possible. It compresses to ZIP, which is a pain if I want to recover only one file, although may be there's the option of only extracting the file I want to recover (through winzip I imagine).

The ImageComparer works very nicely, although it is trigger happy and flags as likely identical pictures shot in the same location: e.g., a picture of mine in front of brussel's Atomium, and one of Marie taken two minutes later in the very same spot.

Haven't tried much of the gridinsoft editor, although I have seen that his regular expression engine does not recognise \t as a tab (!) - hopefully, though, his sorting abilities maty mean that I'll miss a bit less the wonderful unix utilities such as sort, awk, grep. never mind, it can only sort alphabetically the lines, not based for example on single columns - bash scripting still rules...

In the meanwhile, I've started looking for a Linux-based PDA with (possibly) full qwerty keyboard (real or simulated) and GPS capabilities too. may be one day i'll have the time to write something on it. Otherwise, it'll be cool nonetheless. And hopefully useful. :-)

Tuesday, January 16, 2007

My first Wikibution

that is, my first contribution to Wikipedia. In my city's entry, I've added a tidibit of info regarding one of the main sights. It doesn't show my name as I didn't register (yet), but now I have so I'll start adding my little knowledge to the lot already accumulated there...

Monday, January 15, 2007

Quantum Interrogation

Here, is one of the best 50 posts I blogged about last week. An exercise in quantum measurement, substituting the Schrodinger's cat with sleeping puppies, and knowing whether they're in the box without waking them up. cute, indeed

Friday, January 12, 2007

best 50 science blog posts

Coturnix has selected some very good post appeared on scientific blogs during this last period. All of them are worth a read, many of them are excellent altogether. Plus, they cover a lot of different fields so you will not get bored.

pity that Tetrapod's Zoology isn't listed there.

enjoy ;-)

What am I reading...

As promised, here I am ready to disclose my last reads to you.

Well, I already said some time ago that I was going to start "The Botany of Desire" over the Xmas Holidays, so i did. very interesting book, talking about the effect that four plants have had on human civilisations, and we've had on them: the four plants are the Apple, the Tulip, the Cannabis, and the Potato. The book is very well written, as the author is a regular writer for the NY Times. But to my opinion, something is missing: a photographic insert would only have improved it - description are good, but as the provers says, a picture is worth a thousand words.

Other than that, i thouroughly enjoyed it and plan on reading at least some of the references cited, especially those regarding the expansion of the european ecosystem over the americas (and likewise) - and at least one book regarding the rise of angiosperms, that is, plants with flowers (and fruits).

Now that I've finished it, though, what will I read? well, my lovely girlfriend made me a wonderful present, for Xmas: Freakonomics (link to the author's website and blog), which already from the title is the kind of book I am liking more and more... more on this as soon as I start reading it (tonight, outside the airport waiting for her to get back from the eternal city.

Giveaway of the Day

Ehy, let's restart posting!!! sorry but I was too busy for a couple of days with thesis re-writing and re-starting work, so I almost forgot this blog.

here's a nice thing I discovered y/day: the software give away of the day. a neat and nice piece of software given away every day, under the condition that you install it the very same day... yesterday I got an archival/backup solution for free. not bad, since I had been looking for something similar some weeks ago. my backup setup at work is less than perfect, with limited space - this way, I can backup when i want what I want, where I want it.

there's also the corresponding website for games: don't expect far cry, but some arcade game - I DL-ed Bullet candy yesterday, and it's fun enough. :-)

My work antivirus/security suite didn't ruing any bell, so I guess there's no security threats in installing these.


I will be back soon with some more post regarding what I have been reading/doing lately.

cheery-o!

Saturday, January 06, 2007

Follow that taxi!!!

Uhm, if Tom Matthews' taxi really does 675Km/h, I don't think it's going to be easy...

from quattroruote

Non ha creduto ai suoi occhi il 38enne gallese Tom Matthews (nella foto presa dal sito www.southwalesargus.co.uk), quando si è visto recapitare una multa di 60 sterline (circa 90 euro) per essere stato immortalato da un autovelox di Newport all'incredibile velocità di 420 mph (675 km/h).

L'uomo, taxista di professione, si è stupito non tanto perché percorre Cardiff Road diverse volte al giorno e sa benissimo che il limite è di 50 km/h, quanto per l'incredibile prestazione sfoderata dal suo bolide, una Vauxhall "Cavalier" del 1995...

Il responsabile delle postazioni autovelox per il centro-sud del Galles, Phil Davies, ha ammesso che si è trattato di un rarissimo errore di taratura del sistema: "Siamo grati a Mr Matthews per aver portato alla nostra attenzione il problema e ci scusiamo per il disturbo arrecatogli". E pensare che, per un attimo, Matthews si era convinto di aver polverizzato il record stabilito dalla Bugatti "Veyron"...

Thursday, December 21, 2006

back home!!!

Ehy, I'm back home, after one night of driving through the whole belgium and a little (but funny) bit of germany...

I have to say, it was a pain to come back, but now it feels nice...

a few nice things.

my mum's food...

german motorways rocks! asphalt like formula 1 circuits, and... no speed limits!!! pity my gps decided to have me take a shortcut through the mountains... mah...

and I've just half-submitted my thesis! I say half submitted 'cause what I'm submitting isn't the real final version, rather a cobbled up merge of my chapters... am still waiting one from my (almost ex) boss...

now I am off to look for presents...

may be tomorrow I'll post on my latest elucubration: The Copernican Shock!!!

Tuesday, December 19, 2006

bouncin' back and forth...

I write this while pdfcreator is saved on my pc. why do I need this lil' app? 'cause I have to send my thesis as a pdf to my (ex) boss.

I have been writing and correcting all the weekend, and now i'm sealing time to the company to do my own work - just needed some correlation tables... and here they are...

I wish I could put an END to this before Xmas. Unfortunately, my (ex) boss just asked for some more thingies to add. and tonight I'm off to a nocturnal ride of belgium and germany, 4 hours just to get where the plane lift-off from: frankfurt hahn airport...

I will not even enjoy the drive since it'll be dark as hell, have got to be there by 4 in the morning. damn!!! this means leaving at 1 o'clock at the latest...

I better go and catch some sleep while I still can. ciao.

next post will come from sardinia ah ah!!!

Monday, December 18, 2006

The changing ways of Grand Rounds

The NYTimes (:-P) has yet another very interesting contribution: by LAWRENCE K. ALTMAN, M.D., the recount of a century (or so) of grand rounds in american hospital. I did not know of this use, and the paper is interesting, anedoctal and rich in humour too ;-) enjoy ;-)

Friday, December 15, 2006

An Ancient Computer Surprises Scientists

John Noble Wilford, long-standing science writer for the NY Times, and author of one of my favourite books about dinosaurs, writes about the antikitera mechanism, the most complex greek artifact ever found.



I first heard about it from the pages of Martyn Mistere, an irtalian mistery comic where the namesake is an investigator of strange cases. kind of X-files ante litteram, but with lots of histor thrown in - definitely better.

anyway, back to reality: a 3D X-Ray scan revealed that the "thing" is, in fact a mechanism to predict moon phases accordingly to hypparcos theory, and the same scientist probably had a hand in designing it. well, it sounds way cooler than the mysterian hypothesis where the mechanism was suggested to humans by superior intelligences.

Knowing that 2200 years ago we were able to make something that complex, and then we lost the ability for around one thousand years, gives a certain perspective. particularly, may be computers aren't here to last...